Comparison of Brachypodium with rice and sorghum (SyMap)
The JAX Synteny Browser for mouse-human comparative genomics.
visualize regions of conserved synteny between the two genomes is supported by various software applications. However, none of the current application allows researchers to select genomic feature to display or highlight in synteny blocks based biological properties described features (eg, types, functions, and / or associated phenotype). To overcome the usability gap, we developed a web-based browser conserved synteny interactive, The Jackson Laboratory (JAX) Synteny Browser. The browser allows researchers to selectively highlight or feature in the reference genome display and / or genome comparison in accordance with the biological attributes of features.
Although the implementation is currently limited to the browser on the reference genome for the laboratory mouse and human, this software platform agnostic deliberately genome. JAX Synteny Browser software can be used for any two genomes where the genome coordinates for syntenic blocks and attributes defined biological features in one or both genomes available in the widely used standard bioinformatics file formats. JAX Synteny Browser available in: Base code is available from GitHub: Browser and distributed under the Creative Commons Attribution (CC BY).
The advent of high-throughput next-generation sequencing technologies and assembly algorithm improvements have occurred thick accumulation of genomic data in the public domain. This has opened up entry for large scale comparative genome studies, particularly the identification of syntenic block conserved between species, facilitating conservation and evolutionary importance of variation in genome organization. Synteny construction and visualization requires computational and bioinformatics skills to prepare input files for synteny analysis pipeline. Syntenic information on the fish still in the stage of adolescence and scattered in different research domains.
Here, we present a web-based tool ‘Evol2Circos’ to give GUI- user-friendly and web-based tools for analyzing user-specific data for construction synteny and visualization, and to facilitate information browsing using different fish syntenic circos, bar, dual and dot plot. The information generated from this tool can also be used for further downstream analysis. Evol2Circos tested software under Ubuntu Linux. Web-browser, source code, documentation, user guides, example datasets and scripts available
The JAX Synteny Browser for mouse-human comparative genomics.
Aniseed 2019: 4D exploration of genetic data for an extended range of tunicates.
Anise is the premier model organism database for the worldwide community of scientists working on the tunicates, sister-group of vertebrates. Information provided for each species, including functional-described genes and transcripts orthology relationship models with the tunicates, and echinoderms, cephalochordates and vertebrates.
Outside the system genes describe other genetic elements, including repetitive elements and cis-regulatory modules. Gene expression profiles of several thousand genes are formalized in both wild-type and experimental conditions-manipulated, using anatomy formal ontology. This data can be explored through three complementary types of browsers, each offering a different view-point.
Description: A sandwich ELISA for quantitative measurement of Canine Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Canine Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Porcine Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Porcine Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Porcine Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Goat Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Goat Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Goat Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Human Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Human Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Human Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Mouse Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Mouse Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Mouse Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: The protein encoded by the TBXT gene is an embryonic nuclear transcription factor that binds to a specific DNA element, the palindromic T-site. It binds through a region in its N-terminus, called the T-box, and effects transcription of genes required for mesoderm formation and differentiation. The protein is localized to notochord-derived cells.
Description: The protein encoded by the TBXT gene is an embryonic nuclear transcription factor that binds to a specific DNA element, the palindromic T-site. It binds through a region in its N-terminus, called the T-box, and effects transcription of genes required for mesoderm formation and differentiation. The protein is localized to notochord-derived cells.
Description: A sandwich ELISA for quantitative measurement of Rabbit Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Rabbit Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Rabbit Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Monkey Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Monkey Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Monkey Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: Quantitative sandwich ELISA for measuring Mouse Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Mouse Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Mouse Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Human Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Human Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Human Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: A sandwich ELISA for quantitative measurement of Guinea pig Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Guinea pig Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: A sandwich ELISA for quantitative measurement of Guinea pig Brachyury protein(T) in samples from blood, plasma, serum, cell culture supernatant and other biological fluids. This is a high quality ELISA kit developped for optimal performance with samples from the particular species.
Description: Quantitative sandwich ELISA for measuring Canine Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Canine Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Canine Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Chicken Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Chicken Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: Quantitative sandwich ELISA for measuring Chicken Brachyury protein (T) in samples from cell culture supernatants, serum, whole blood, plasma and other biological fluids.
Description: GlpK E. Coli Recombinant produced in E. coli is a single, non-glycosylated polypeptide chain containing 525 amino acids (1-502 a.a) and having a molecular mass of 58.6 kDa.;GlpK is fused to a 23 amino acid His-tag at N-terminus& purified by proprietary chromatographic techniques.
Recombinant Toxoplasma Gondii p30 Protein (E. coli)
Description: Recombinant Human EGF Protein (Asn 971-Arg 1023) was expressed in E. coli, with a molecular weight of 6.3 kDa. (Accession ID: NP_001954.2)
Recombinant Human EGF Protein (aa 971-1023) (E. coli)
Description: Recombinant Human EGF Protein (Asn 971-Arg 1023) was expressed in E. coli, with a molecular weight of 6.3 kDa. (Accession ID: NP_001954.2)
Browser summarizes the development of gene- or information-centric region. advanced genome browsers integrate genetic features of genes or sets of genes within a species vicinity. synteny Browser A Genomicus explore the local gene sequence conservation throughout deuterostome. This new release includes an extended taxonomic variety of 14 species, including for the first time non-ascidian species, which appendicularian Oikopleura dioica.
